Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations Daniel Langenkämper, Tobias Jakobi, Dustin Feld, Lukas Jelonek, Alexander Goesmann, Tim W. Nattkemper Jan 1, 2016 PDF Cite DOI DNA FPGA Bioinformatics Automatic High throughput Multi-core Sequence Analysis Automatic parallelization gpu parallelization Related Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming Large-scale compression of genomic sequence databases with the Burrows-Wheeler transform Deep computational circular RNA analytics from RNA-seq data Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines